ICD-10-CM
icd10cm(icd = "T76.02XA") |>
mutate(Chapter = paste0("* ", icd_ch_name, " \n ", "* Range: [", icd_ch_range, "]"),
Section = paste0("* ", icd_sec_name, " \n ", "* Range: [", icd_sec_range, "]")
) |>
select("ICD-10-Code" = icd_code,
Description = icd_description,
Chapter,
Section,
Abbreviation = icd_ch_abb,
"Conflict Group" = icd_conflict_group,
"Conflict Rule" = icd_conflict_rule) |>
display_long() |>
gt(groupname_col = "name",
row_group_as_column = TRUE) |>
fmt_markdown() |>
gt_style(tablign = "right",
tabsize = 16,
tabwt = "bold") |>
tab_style(
style = cell_text(
font = google_font(name = "Fira Code")),
locations = cells_body(
columns = contains("value"))) |>
tab_style(
style = list(
cell_fill(color = "powderblue"),
cell_text(weight = "bold"),
cell_borders(
sides = c("all"),
color = "powderblue",
weight = px(3))
),
locations = cells_row_groups())| ICD-10-Code | T76.02XA |
| Description | Child neglect or abandonment, suspected, initial encounter |
| Chapter |
|
| Section |
|
| Abbreviation | INJ |
| Conflict Group | Age |
| Conflict Rule | Pediatric (Ages 0-17) |
The NLM’s ICD-10-CM API
The National Library of Medicine’s ICD-10-CM API is a RESTful API that provides access to the current ICD-10-CM code set.
The API allows users to search for codes by code or keyword(term), and returns the code and its description. Searching is case insensitive and greedy The following are some examples:
Returns the seven ICD-10 codes beginning with
A15:
icd10api(icd_code = "A15")#> # A tibble: 7 × 2
#> icd_code icd_description
#> <chr> <chr>
#> 1 A15.0 Tuberculosis of lung
#> 2 A15.4 Tuberculosis of intrathoracic lymph nodes
#> 3 A15.5 Tuberculosis of larynx, trachea and bronchus
#> 4 A15.6 Tuberculous pleurisy
#> 5 A15.7 Primary respiratory tuberculosis
#> 6 A15.8 Other respiratory tuberculosis
#> 7 A15.9 Respiratory tuberculosis unspecifiedReturns all 344 ICD-10 codes associated with tuberculosis:
icd10api(term = "tuber", field = "both")#> # A tibble: 344 × 2
#> icd_code icd_description
#> <chr> <chr>
#> 1 A15.0 Tuberculosis of lung
#> 2 A15.4 Tuberculosis of intrathoracic lymph nodes
#> 3 A15.5 Tuberculosis of larynx, trachea and bronchus
#> 4 A15.6 Tuberculous pleurisy
#> 5 A15.7 Primary respiratory tuberculosis
#> 6 A15.8 Other respiratory tuberculosis
#> 7 A15.9 Respiratory tuberculosis unspecified
#> 8 A17.0 Tuberculous meningitis
#> 9 A17.1 Meningeal tuberculoma
#> 10 A17.81 Tuberculoma of brain and spinal cord
#> # ℹ 334 more rowsReturns the two ICD-10 codes associated with pleurisy:
icd10api(term = "pleurisy", field = "both")#> # A tibble: 2 × 2
#> icd_code icd_description
#> <chr> <chr>
#> 1 R09.1 Pleurisy
#> 2 A15.6 Tuberculous pleurisyThe field Parameter
The field parameter allows users to specify whether they
want to search for ICD-10-CM codes by the codes themselves or by terms
associated with their description. It defaults to "code"
and it’s behavior warrants some explanation.
If you’re searching for codes beginning with a certain letter, you
must set the field parameter to "code" or it
will return both codes and terms that contain that letter.
For instance, the following call returns ICD-10 codes and descriptions containing the letter “Z”:
icd10api(icd_code = "z", field = "both", limit = 50)#> # A tibble: 50 × 2
#> icd_code icd_description
#> <chr> <chr>
#> 1 A28.8 Other specified zoonotic bacterial diseases, not elsewhere classifi…
#> 2 A28.9 Zoonotic bacterial disease, unspecified
#> 3 A92.5 Zika virus disease
#> 4 B02.0 Zoster encephalitis
#> 5 B02.1 Zoster meningitis
#> 6 B02.30 Zoster ocular disease, unspecified
#> 7 B02.31 Zoster conjunctivitis
#> 8 B02.32 Zoster iridocyclitis
#> 9 B02.33 Zoster keratitis
#> 10 B02.34 Zoster scleritis
#> # ℹ 40 more rowsWhile the call below returns only the ICD-10 codes containing “Z”:
icd10api(icd_code = "z", field = "code", limit = 50)#> # A tibble: 50 × 2
#> icd_code icd_description
#> <chr> <chr>
#> 1 Z00.00 Encounter for general adult medical examination without abnormal fi…
#> 2 Z00.01 Encounter for general adult medical examination with abnormal findi…
#> 3 Z00.110 Health examination for newborn under 8 days old
#> 4 Z00.111 Health examination for newborn 8 to 28 days old
#> 5 Z00.121 Encounter for routine child health examination with abnormal findin…
#> 6 Z00.129 Encounter for routine child health examination without abnormal fin…
#> 7 Z00.2 Encounter for examination for period of rapid growth in childhood
#> 8 Z00.3 Encounter for examination for adolescent development state
#> 9 Z00.5 Encounter for examination of potential donor of organ and tissue
#> 10 Z00.6 Encounter for examination for normal comparison and control in clin…
#> # ℹ 40 more rowsICD-10-CM Code Edits
ex_data() |>
dplyr::mutate(patient_age = years_floor(date_of_birth,
date_of_service)) |>
dplyr::left_join(search_edits()) |>
dplyr::filter(icd_conflict_group == "Age") |>
dplyr::mutate(conflict = apply_age_edits(rule = icd_conflict_rule,
age = patient_age)) |>
dplyr::filter(!is.na(conflict)) |>
dplyr::select(-icd_conflict_group) |>
gt(groupname_col = "icd_conflict_rule",
row_group_as_column = TRUE) |>
gt_style() |>
tab_options(column_labels.hidden = FALSE)| date_of_birth | date_of_service | icd_code | patient_age | icd_description | conflict | |
|---|---|---|---|---|---|---|
| Adult (Ages 15-124) | 2015-11-27 | 2023-01-08 | Z00.00 | 7 | Encntr for general adult medical exam w/o abnormal findings | Age Conflict |
| 2014-01-25 | 2023-06-27 | Z00.00 | 9 | Encntr for general adult medical exam w/o abnormal findings | Age Conflict | |
| 2012-05-11 | 2022-09-21 | Z00.00 | 10 | Encntr for general adult medical exam w/o abnormal findings | Age Conflict | |
| Pediatric (Ages 0-17) | 2005-10-21 | 2024-01-18 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict |
| 2005-10-21 | 2023-12-08 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict | |
| 2005-10-21 | 2023-12-01 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict | |
| 2005-10-21 | 2023-11-16 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict | |
| 2005-10-21 | 2024-02-08 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict | |
| 2005-10-21 | 2023-11-09 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict | |
| 2005-10-21 | 2023-11-02 | F64.2 | 18 | Gender identity disorder of childhood | Age Conflict |